Jake Y. Chen, Ph.D.

Principle Investigator (Jan 2004-present)
Assistant Professor of Informatics & Computer Science

jakechen@iupui.edu

Sudhir R. Chowbina

Graduate Research Assistant (August 2008-present)
Pathway Data Integration

schowbin@iupui.edu

Jieun Jeong, Ph.D.

Postdoc Fellow (August 2008-present)
Translational Bioinformatics

jeongji@iupui.edu

Ragini Pandey, M.S.

Research Associate (January 2008-present)
Graduate Research Assistant (Spring 2007-December 2008)
Network Pharmacology, Systems Biology Infrastructure Development

rapandey@iupui.edu

Xiaogang Wu, Ph.D.

Postdoc Fellow (August 2007-present)
Translational Systems Biology

wu33@iupui.edu

Fan Zhang, Ph.D.

Postdoc Fellow (July 2008-present)
Translational Proteomics

fanzhang@iupui.edu

Lavanya Dhanapalan, M.S.

Research Assistant (August 2005-November 2007)
Purdue Computer Science M.S. Thesis
Biological Data Integration with the Semantic Web

Current: Software Engineer, Manhattan Associates, Atlanta, GA

Scott H. Harrison, Ph.D.

Postdoc Fellow (May 2007-January 2009), from Michigan State University, MI
Clinical Proteomics & Semantic Data Integrationn

sharrisn@iupui.edu

Harini Kasamsetty, M.S.

Research Assistant (Summer 2006-December 2007)
IU Bioinformatics M.S. Thesis
Network and Pathway Biology

Current: Bioinformatics Consultant, Dow Agrosciences, Indianapolis, IN

Warren Killian, M.S.

MS Project Student (Fall 2004-Summer 2006)
Purdue Computer Science M.S. Project
Complex Query Modeling

Current: Software Engineer, Indianapolis, IN

Sharmila Jothirajah, M.S.

MS Thesis Student (Spring 2005-Spring 2007)
Purdue Computer Science M.S. Thesis
Biological Database Management System

Current: Bioinformatics Developer, Regenstrief Institute, Indianapolis, IN

Shailaja Taduri, M.S.

MS Project Student (Fall 2005-Spring 2007)
Purdue Computer Science M.S. Project
Personalized Health Records

Current: Software Engineer, NCAA, Indianapolis, IN

SudhaRani Mamidipalli, M.S.

Research Assistant (Spring 2005-Spring 2006)
IU Bioinformatics M.S. Thesis
Human Protein Interactome Data Integration

Current: Medical Informatics Analyst, Eli Lilly, Indianapolis, IN

Sudipto Saha, Ph.D.

Postdoc Fellow (March 2007-August 2008)
Clinical Proteomics

sahas@iupui.edu

Mingyi Wang, Ph.D.

Postdoc Fellow (March 2007-Febuary 2008)
Computational Biology and Machine Learning

Current: Postdoc Researcher, Nobel Foundation, Dallas, TX

Zhong Yan, M.S.

Research Assistant (Fall 2005-Fall 2006)
IU Bioinformatics M.S. Thesis
Integrated Proteomics and Systems Biology Analysis

Current: Data Analyst, SallieMae, Indianapolis, IN

Hongyun Zhu, M.S.

Visiting Scholar (November 2007-November 2008)
Computerl System Management

zhuho@iupui.edu

Bhavna Choudhury, M.S.

Bioinformatics Independent Studies (Fall 2004-Spring 2005)
Biomedical Image Data Mining

Current: Bioinformatics Scientist, Asuragen, Inc, Austin, TX

Hui Huang

Bioinformatics PhD Candidate (Fall 2008)
Research Rotation Study on Cancer Systems Biology

Usha Katta

Bioinformatics Independent Studies (Spring 2005-Fall 2007)
IU Bioinformatics M.S. Candidate
Personalization Techniques in Bioinformatics

Current: Database Developer, EMC Corporation, Inc, Boston, MA

Shubhada Labade

Consulting Programmer (Sept 2007-November 2007)
Web-based Applilcation Software Development

Current: Software Programmer, General Electric, Minneapolis, MN

Arti Singh, M.S.

Research Assistant (Spring 2006-Summer 2006)
Protein Interaction Network Analysis

Current: Software Engineer, Teranode, Inc., Boston, MA

Yijing Su, M.S.

Bioinformatics Independent Studies (Fall 2006)
Protein Interaction Network Analysis

Current: Data Analyst, Maryland

Ao Zhou

Bioinformatics PhD Candidate (Fall 2008)
Research Rotation Study on Clinical Proteomics

Pranav Vaidya, M.S.

Research Assistant (Fall 2005-Spring 2006)
Purdue Electrical and Computer Engineering M.S. Thesis
Integrated Proteomics Software Development

Manjula Alimina, M.S.

Affiliate Scienist (Spring 2004-Fall 2005)
Bioinformatics Data Warehousing

malimina@iupui.edu

Tianxiao Huan

Affiliate Scientist (August 2007-present)
Also: from College of Life Sciences, Shandong University, China
Translational Bioinformatics

huant@iupui.edu

Jiao Li

Affiliate Scientist (Sept 2007-present)
Also: from Dept. of Computer Science & Technology, Tsinghua University, China
Biomedical Literature Mining

li69@iupui.edu

David Michael Grobe

Affiliate Scientist (Fall 2007-present)
Genome-wide Association Study

dgrobe@iupui.edu

Andrey Sivachenko, Ph.D.

Affiliate Senior Scientist (2004-present)
MIT Broad Institute
The "ProteoLens" Project

asivache@iupui.edu